Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006067annotation not available (700 aa)    
Predicted Functional Partners:
TGM1
Transglutaminase 1.
   
  0.899
SERPINB12
Serpin family B member 12.
   
 0.779
CASP14
Caspase 14.
   
 
 0.734
CDSN
Corneodesmosin.
   
  
 0.725
ENSCAPP00000011701
annotation not available
    
   0.713
SBSN
Suprabasin.
   
 
 0.664
DSG1
Desmoglein 1.
   
 
 0.657
NOTCH1
Notch receptor 1.
    
 0.613
TGM4
Transglutaminase 4.
   
  0.608
F13A1
Coagulation factor XIII A chain.
   
  0.608
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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