STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006069annotation not available (387 aa)    
Predicted Functional Partners:
H2AZ2
H2A.Z variant histone 2.
   
 
 0.930
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.850
NCL
Nucleolin.
   
 
 0.772
MACROH2A2
macroH2A.2 histone.
    
 
 0.719
MACROH2A1
macroH2A.1 histone.
    
 
 0.719
ENSCAPP00000003280
annotation not available
   
 
 0.699
SHISA4
Shisa family member 4.
   
 
 0.699
IPO9
Importin 9.
   
 
 0.699
ENSCAPP00000012908
annotation not available
   
 
 0.699
ENSCAPP00000017148
annotation not available
   
 
 0.699
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.