Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006069annotation not available (387 aa)    
Predicted Functional Partners:
NAP1L4
Nucleosome assembly protein 1 like 4.
   
 
 0.943
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.935
FNTA
Farnesyltransferase, CAAX box, alpha.
   
 
 0.929
EP300
E1A binding protein p300.
    
 
 0.900
H2AZ2
H2A.Z variant histone 2.
   
 
 0.882
FBXW7
F-box and WD repeat domain containing 7.
    
   0.841
ENSCAPP00000014327
annotation not available
   
 
 0.834
ENSCAPP00000001550
annotation not available
    
 
 0.829
ENSCAPP00000017159
annotation not available
    
 
 0.829
NCL
Nucleolin.
   
 
 0.800
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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