STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOP1Thimet oligopeptidase 1. (683 aa)    
Predicted Functional Partners:
KNG1
Kininogen 1.
     
 0.954
CIB1
Calcium and integrin binding 1.
    
 
 0.606
LUM
Lumican.
      
 0.568
ENSCAPP00000009470
annotation not available
      
 0.568
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
   
  
 0.563
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.561
NIN
Ninein.
      
 0.558
SPRY4
Sprouty RTK signaling antagonist 4.
      
 0.553
AADACL2
Arylacetamide deacetylase like 2.
     
 0.549
AADAC
Arylacetamide deacetylase.
     
 0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.