STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB34RAB34, member RAS oncogene family. (241 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.877
GDI1
GDP dissociation inhibitor 1.
    
 0.861
GDI2
GDP dissociation inhibitor 2.
    
 0.861
COG6
Component of oligomeric golgi complex 6.
   
 0.856
VPS53
VPS53 subunit of GARP complex.
    
 0.851
ARL1
ADP ribosylation factor like GTPase 1.
    
 0.846
VPS52
VPS52 subunit of GARP complex.
    
 0.846
ENSCAPP00000017221
annotation not available
    
 0.838
ENSCAPP00000000647
annotation not available
    
 
 0.793
BICD1
BICD cargo adaptor 1.
    
 0.793
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.