Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCM2Glial cells missing transcription factor 2. (463 aa)    
Predicted Functional Partners:
GCM1
Glial cells missing transcription factor 1.
     
 0.911
ENSCAPP00000006305
annotation not available
   
   0.908
FHL3
Four and a half LIM domains 3.
   
   0.907
ENSCAPP00000006311
annotation not available
   
   0.812
FOXN1
Forkhead box N1.
    
 
 0.806
FOXI1
Forkhead box I1.
   
 
 0.665
ENSCAPP00000015543
annotation not available
   
  
 0.632
ENSCAPP00000004405
annotation not available
   
 
 0.618
ENSCAPP00000011828
annotation not available
   
 
 0.618
CASR
Calcium sensing receptor.
   
 
 0.618
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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