Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006089annotation not available (160 aa)    
Predicted Functional Partners:
NCOA4
Nuclear receptor coactivator 4.
    
 0.978
ENSCAPP00000015465
annotation not available
   
 0.964
ENSCAPP00000010511
annotation not available
   
 0.944
FXN
Frataxin.
    
 0.923
HMOX1
Heme oxygenase 1.
  
 
 0.896
HMOX2
Heme oxygenase 2.
  
 
 0.869
HEPHL1
Hephaestin like 1.
     
 0.861
FECH
Ferrochelatase.
    
 0.851
CP
Ceruloplasmin.
     
 0.849
ENSCAPP00000012700
annotation not available
   
 
 0.681
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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