STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006095annotation not available (140 aa)    
Predicted Functional Partners:
DOP1A
DOP1 leucine zipper like protein A.
    
 
 0.818
DOP1B
DOP1 leucine zipper like protein B.
    
 
 0.818
ENSCAPP00000017630
annotation not available
    
   0.804
ATP9B
ATPase phospholipid transporting 9B (putative).
    
 
 0.738
ATP9A
ATPase phospholipid transporting 9A (putative).
    
 
 0.738
CCDC103
Coiled-coil domain containing 103.
    
 
 0.732
MPDU1
mannose-P-dolichol utilization defect 1.
      
 0.732
SNX1
Sorting nexin 1.
    
   0.721
ENSCAPP00000010045
annotation not available
     
  0.678
ENSCAPP00000012851
annotation not available
      
 0.678
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.