STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006095annotation not available (140 aa)    
Predicted Functional Partners:
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
     
 0.684
DOP1A
DOP1 leucine zipper like protein A.
    
 
 0.627
DOP1B
DOP1 leucine zipper like protein B.
    
 
 0.627
ATP9B
ATPase phospholipid transporting 9B (putative).
    
 
 0.613
CCDC103
Coiled-coil domain containing 103.
    
 
 0.613
ATP9A
ATPase phospholipid transporting 9A (putative).
    
 
 0.613
ENSCAPP00000012176
annotation not available
    
  0.612
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.571
ENSCAPP00000007749
annotation not available
      
 0.548
ENSCAPP00000012851
annotation not available
      
 0.548
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.