STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1193 aa)    
Predicted Functional Partners:
RGP1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.998
RASGRP3
RAS guanyl releasing protein 3.
    
  0.934
RAB6A
RAB6A, member RAS oncogene family.
    
 0.917
RAB6B
RAB6B, member RAS oncogene family.
    
 0.917
KNDC1
Kinase non-catalytic C-lobe domain containing 1.
    
  0.914
ENSCAPP00000017221
annotation not available
   
 0.890
ENSCAPP00000015905
annotation not available
    
  0.887
RAB34
RAB34, member RAS oncogene family.
    
 0.877
PRDX6
Peroxiredoxin 6.
    
 0.873
RAB33A
RAB33A, member RAS oncogene family.
    
 0.866
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.