Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1193 aa)    
Predicted Functional Partners:
RGP1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.998
RMC1
Regulator of MON1-CCZ1.
   
 
  0.992
ELMO1
Engulfment and cell motility 1.
     
  0.991
EIF2B5
Eukaryotic translation initiation factor 2B subunit epsilon.
     
  0.991
EIF2B3
Eukaryotic translation initiation factor 2B subunit gamma.
     
  0.991
EIF2B1
Eukaryotic translation initiation factor 2B subunit alpha.
     
  0.991
SMCR8
SMCR8-C9orf72 complex subunit.
     
  0.991
MON1A
MON1 homolog A, secretory trafficking associated.
   
 
  0.991
EIF2B2
Eukaryotic translation initiation factor 2B subunit beta.
     
  0.991
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
     
  0.991
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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