Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006112annotation not available (65 aa)    
Predicted Functional Partners:
ENSCAPP00000011285
annotation not available
    
   0.797
DEFB124
Defensin beta 124.
     
 0.733
ENSCAPP00000002972
annotation not available
     
 0.711
DEFB110
Defensin beta 110.
     
 0.682
DEFB113
Defensin beta 113.
     
 0.676
ENSCAPP00000007533
annotation not available
     
 0.556
TFAP2D
Transcription factor AP-2 delta.
      
 0.533
PRSS45P
Serine protease 45, pseudogene.
      
 0.520
ENSCAPP00000005863
annotation not available
    
   0.511
ENSCAPP00000012511
annotation not available
    
   0.511
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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