Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006121annotation not available (196 aa)    
Predicted Functional Partners:
DSG1
Desmoglein 1.
      
 0.909
STK24
Serine/threonine kinase 24.
      
 0.794
SLC1A1
Solute carrier family 1 member 1.
  
 
 0.725
ENSCAPP00000011650
annotation not available
   
 
 0.713
SLC1A6
Solute carrier family 1 member 6.
  
 
 0.713
SLC22A4
Solute carrier family 22 member 4.
   
  
 0.679
SLC1A3
Solute carrier family 1 member 3.
  
 
 0.678
SLC22A15
Solute carrier family 22 member 15.
      
 0.653
SLC7A1
Solute carrier family 7 member 1.
    
 
 0.651
NADK
NAD kinase.
     
  0.646
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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