STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLIP3CAP-Gly domain containing linker protein 3. (554 aa)    
Predicted Functional Partners:
CYLD
CYLD lysine 63 deubiquitinase.
    
 0.799
MTOR
Mechanistic target of rapamycin kinase.
   
  0.652
BUB3
BUB3 mitotic checkpoint protein.
    
 0.640
RIPK1
Receptor interacting serine/threonine kinase 1.
    
  0.602
ZBTB7C
Zinc finger and BTB domain containing 7C.
    
 
 0.588
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.586
APLP1
Amyloid beta precursor like protein 1.
   
  
 0.581
MAPRE3
Microtubule associated protein RP/EB family member 3.
    
 
 0.563
DNMT3A
DNA methyltransferase 3 alpha.
    
 
 0.563
PHKB
Phosphorylase kinase regulatory subunit beta.
      
 0.563
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.