Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A19Solute carrier family 6 member 19. (633 aa)    
Predicted Functional Partners:
ENSCAPP00000000088
annotation not available
   
 
 0.982
SLC1A7
Solute carrier family 1 member 7.
  
 
 0.898
SLC36A2
Solute carrier family 36 member 2.
   
  
 0.850
ENSCAPP00000006405
annotation not available
    
 0.845
SLC1A3
Solute carrier family 1 member 3.
    
 0.798
ACE
Angiotensin I converting enzyme.
   
 
 0.757
SLC1A1
Solute carrier family 1 member 1.
  
 
 0.724
SLC1A6
Solute carrier family 1 member 6.
    
 0.651
KALRN
Kalirin RhoGEF kinase.
     
 0.636
RHOBTB2
Rho related BTB domain containing 2.
    
 
 0.620
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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