MSH6 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MSH6

mutS homolog 6. (1250 aa)

Predicted Functional Partners:

MSH2

0.999

MLH1

0.998

PCNA

0.998

ENSCAPP00000001141

0.997

ENSCAPP00000007061

0.996

POLD1

0.993

MLH3

0.989

ENSCAPP00000016576

0.986

ENSCAPP00000011535

0.985

ENSCAPP00000013163

0.980

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001141	ENSCAPP00000007061	ENSCAPP00000001141	ENSCAPP00000007061	annotation not available	annotation not available	0.977
ENSCAPP00000001141	ENSCAPP00000011535	ENSCAPP00000001141	ENSCAPP00000011535	annotation not available	annotation not available	0.971
ENSCAPP00000001141	ENSCAPP00000013163	ENSCAPP00000001141	ENSCAPP00000013163	annotation not available	annotation not available	0.973
ENSCAPP00000001141	ENSCAPP00000016576	ENSCAPP00000001141	ENSCAPP00000016576	annotation not available	annotation not available	0.981
ENSCAPP00000001141	MLH1	ENSCAPP00000001141	ENSCAPP00000002283	annotation not available	mutL homolog 1.	0.999
ENSCAPP00000001141	MLH3	ENSCAPP00000001141	ENSCAPP00000001839	annotation not available	mutL homolog 3.	0.973
ENSCAPP00000001141	MSH2	ENSCAPP00000001141	ENSCAPP00000008835	annotation not available	mutS homolog 2.	0.998
ENSCAPP00000001141	MSH6	ENSCAPP00000001141	ENSCAPP00000006138	annotation not available	mutS homolog 6.	0.997
ENSCAPP00000001141	PCNA	ENSCAPP00000001141	ENSCAPP00000014064	annotation not available	Proliferating cell nuclear antigen.	0.920
ENSCAPP00000001141	POLD1	ENSCAPP00000001141	ENSCAPP00000003618	annotation not available	DNA polymerase delta 1, catalytic subunit.	0.981
ENSCAPP00000007061	ENSCAPP00000001141	ENSCAPP00000007061	ENSCAPP00000001141	annotation not available	annotation not available	0.977
ENSCAPP00000007061	ENSCAPP00000011535	ENSCAPP00000007061	ENSCAPP00000011535	annotation not available	annotation not available	0.971
ENSCAPP00000007061	ENSCAPP00000013163	ENSCAPP00000007061	ENSCAPP00000013163	annotation not available	annotation not available	0.956
ENSCAPP00000007061	ENSCAPP00000016576	ENSCAPP00000007061	ENSCAPP00000016576	annotation not available	annotation not available	0.985
ENSCAPP00000007061	MLH1	ENSCAPP00000007061	ENSCAPP00000002283	annotation not available	mutL homolog 1.	0.997
ENSCAPP00000007061	MLH3	ENSCAPP00000007061	ENSCAPP00000001839	annotation not available	mutL homolog 3.	0.971
ENSCAPP00000007061	MSH2	ENSCAPP00000007061	ENSCAPP00000008835	annotation not available	mutS homolog 2.	0.996
ENSCAPP00000007061	MSH6	ENSCAPP00000007061	ENSCAPP00000006138	annotation not available	mutS homolog 6.	0.996
ENSCAPP00000007061	PCNA	ENSCAPP00000007061	ENSCAPP00000014064	annotation not available	Proliferating cell nuclear antigen.	0.880
ENSCAPP00000007061	POLD1	ENSCAPP00000007061	ENSCAPP00000003618	annotation not available	DNA polymerase delta 1, catalytic subunit.	0.966