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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABITRAMActin binding transcription modulator. (145 aa)    
Predicted Functional Partners:
PUS10
Pseudouridine synthase 10.
    
   0.840
GPN3
GPN-loop GTPase 3.
   
    0.629
ARMC1
Armadillo repeat containing 1.
      
 0.561
WDYHV1
WDYHV motif containing 1.
      
 0.560
FRRS1L
Ferric chelate reductase 1 like.
      
 0.531
PEX26
Peroxisomal biogenesis factor 26.
      
 0.527
PEX6
Peroxisomal biogenesis factor 6.
      
 0.441
ENSCAPP00000010034
annotation not available
      
 0.438
ELP2
Elongator acetyltransferase complex subunit 2.
      
 0.407
ZNF706
Zinc finger protein 706.
   
  
 0.406
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.