STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMMD4COMM domain containing 4. (226 aa)    
Predicted Functional Partners:
CCDC22
Coiled-coil domain containing 22.
    
 0.994
COMMD9
COMM domain containing 9.
   
 0.993
ENSCAPP00000014595
annotation not available
   
 0.993
CCDC93
Coiled-coil domain containing 93.
    
 
 0.985
DENND10
DENN domain containing 10.
    
 
 0.985
VPS26C
VPS26 endosomal protein sorting factor C.
    
 
 0.980
ENSCAPP00000012458
annotation not available
   
 0.978
ENSCAPP00000018579
annotation not available
    
 
 0.971
E2F6
E2F transcription factor 6.
    
 
 0.959
ENSCAPP00000015803
annotation not available
    
 
 0.957
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.