Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRSS12Serine protease 12. (534 aa)    
Predicted Functional Partners:
L1CAM
L1 cell adhesion molecule.
    
 
 0.720
CC2D1A
Coiled-coil and C2 domain containing 1A.
      
 0.688
AADACL4
Arylacetamide deacetylase like 4.
   
 0.681
SCN4B
Sodium voltage-gated channel beta subunit 4.
      
 0.681
BOP1
BOP1 ribosomal biogenesis factor.
      
 0.678
NRG1
Neuregulin 1.
    
 0.627
MGAT5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
    
 
 0.626
CRBN
Cereblon.
      
 0.606
SERPINI1
Serpin family I member 1.
   
 0.593
AGRN
Agrin.
    
 
 0.580
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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