Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM4Zinc finger MYM-type containing 4. (1217 aa)    
Predicted Functional Partners:
ZMYM2
Zinc finger MYM-type containing 2.
   
   0.959
KDM1A
Lysine demethylase 1A.
   
 0.914
UBQLN4
Ubiquilin 4.
    
 0.893
ENSCAPP00000005686
annotation not available
   
 0.877
ZMYM3
Zinc finger MYM-type containing 3.
   
   0.838
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.800
ENSCAPP00000009010
annotation not available
    
 0.783
ENSCAPP00000004459
annotation not available
   
 0.759
CIPC
CLOCK interacting pacemaker.
    
   0.758
SGSM3
Small G protein signaling modulator 3.
      
 0.752
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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