STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM4Zinc finger MYM-type containing 4. (1217 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.769
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
   
  0.753
ENSCAPP00000000270
annotation not available
   
 0.693
UBQLN4
Ubiquilin 4.
    
 0.677
ENSCAPP00000013350
annotation not available
   
 0.670
ENSCAPP00000006586
annotation not available
    
 0.664
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.636
GLYR1
Glyoxylate reductase 1 homolog.
    
  0.598
KDM1A
Lysine demethylase 1A.
   
 
 0.597
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.595
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.