STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONP1Lon peptidase 1, mitochondrial. (661 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
 
 0.962
NDUFS7
NADH:ubiquinone oxidoreductase core subunit S7.
  
   0.960
ATM
ATM serine/threonine kinase.
      
 0.928
IARS2
isoleucyl-tRNA synthetase 2, mitochondrial.
   
 
 0.884
ACO2
Aconitase 2.
   
 
 0.882
HSPD1
Heat shock protein family D (Hsp60) member 1.
  
 0.866
CLPP
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
  
 
 0.854
PMPCA
Peptidase, mitochondrial processing alpha subunit.
  
 
 0.847
IDH3A
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
  
 
 0.818
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.808
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.