Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR83OSWD repeat domain 83 opposite strand. (54 aa)    
Predicted Functional Partners:
ENSCAPP00000002863
annotation not available
    
 0.994
ENSCAPP00000013337
annotation not available
   
 0.992
TMEM147
Transmembrane protein 147.
   
 0.990
NCLN
Nicalin.
    
 0.984
STUB1
STIP1 homology and U-box containing protein 1.
   
 
  0.925
ENSCAPP00000002134
annotation not available
   
 
 0.923
PSMG1
Proteasome assembly chaperone 1.
   
 
  0.923
CDC37
Cell division cycle 37.
   
 
  0.923
SGTA
Small glutamine rich tetratricopeptide repeat containing alpha.
   
 
 0.920
SGTB
Small glutamine rich tetratricopeptide repeat containing beta.
   
 
  0.920
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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