Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM26Tripartite motif containing 26. (549 aa)    
Predicted Functional Partners:
LARP7
La ribonucleoprotein 7, transcriptional regulator.
    
 
 0.874
SPINDOC
Spindlin interactor and repressor of chromatin binding.
      
 0.802
ENSCAPP00000010002
annotation not available
      
 0.755
ZBTB38
Zinc finger and BTB domain containing 38.
    
  0.735
RACK1
Receptor for activated C kinase 1.
    
   0.721
ANLN
Anillin actin binding protein.
    
   0.721
RECQL4
RecQ like helicase 4.
    
   0.721
CDC16
Cell division cycle 16.
    
  0.715
CDC27
Cell division cycle 27.
    
  0.697
TTC37
Tetratricopeptide repeat domain 37.
    
 
 0.683
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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