ENSCAPP00000006160 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSCAPP00000006160

annotation not available (214 aa)

Predicted Functional Partners:

ENSCAPP00000011129

0.989

XYLB

0.979

TKT

0.978

PGD

0.968

TKTL2

0.955

TKTL1

0.955

TALDO1

0.938

H6PD

0.898

ENSCAPP00000002344

0.862

ENSCAPP00000003315

0.862

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000002344	ENSCAPP00000006160	ENSCAPP00000002344	ENSCAPP00000006160	annotation not available	annotation not available	0.862
ENSCAPP00000002344	ENSCAPP00000011129	ENSCAPP00000002344	ENSCAPP00000011129	annotation not available	annotation not available	0.869
ENSCAPP00000002344	PGD	ENSCAPP00000002344	ENSCAPP00000009065	annotation not available	Phosphogluconate dehydrogenase.	0.863
ENSCAPP00000002344	TALDO1	ENSCAPP00000002344	ENSCAPP00000012092	annotation not available	Transaldolase 1.	0.731
ENSCAPP00000002344	TKT	ENSCAPP00000002344	ENSCAPP00000017795	annotation not available	Transketolase.	0.582
ENSCAPP00000002344	TKTL1	ENSCAPP00000002344	ENSCAPP00000009777	annotation not available	Transketolase like 1.	0.582
ENSCAPP00000002344	TKTL2	ENSCAPP00000002344	ENSCAPP00000001311	annotation not available	Transketolase like 2.	0.582
ENSCAPP00000002344	XYLB	ENSCAPP00000002344	ENSCAPP00000005716	annotation not available	Xylulokinase.	0.529
ENSCAPP00000003315	ENSCAPP00000006160	ENSCAPP00000003315	ENSCAPP00000006160	annotation not available	annotation not available	0.862
ENSCAPP00000003315	ENSCAPP00000011129	ENSCAPP00000003315	ENSCAPP00000011129	annotation not available	annotation not available	0.869
ENSCAPP00000003315	PGD	ENSCAPP00000003315	ENSCAPP00000009065	annotation not available	Phosphogluconate dehydrogenase.	0.863
ENSCAPP00000003315	TALDO1	ENSCAPP00000003315	ENSCAPP00000012092	annotation not available	Transaldolase 1.	0.731
ENSCAPP00000003315	TKT	ENSCAPP00000003315	ENSCAPP00000017795	annotation not available	Transketolase.	0.582
ENSCAPP00000003315	TKTL1	ENSCAPP00000003315	ENSCAPP00000009777	annotation not available	Transketolase like 1.	0.582
ENSCAPP00000003315	TKTL2	ENSCAPP00000003315	ENSCAPP00000001311	annotation not available	Transketolase like 2.	0.582
ENSCAPP00000003315	XYLB	ENSCAPP00000003315	ENSCAPP00000005716	annotation not available	Xylulokinase.	0.529
ENSCAPP00000006160	ENSCAPP00000002344	ENSCAPP00000006160	ENSCAPP00000002344	annotation not available	annotation not available	0.862
ENSCAPP00000006160	ENSCAPP00000003315	ENSCAPP00000006160	ENSCAPP00000003315	annotation not available	annotation not available	0.862
ENSCAPP00000006160	ENSCAPP00000011129	ENSCAPP00000006160	ENSCAPP00000011129	annotation not available	annotation not available	0.989
ENSCAPP00000006160	H6PD	ENSCAPP00000006160	ENSCAPP00000018398	annotation not available	Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.	0.898