STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FDX1Ferredoxin 1. (124 aa)    
Predicted Functional Partners:
FDXR
Ferredoxin reductase.
   
 0.999
ISCU
Iron-sulfur cluster assembly enzyme.
  
 0.990
ENSCAPP00000008637
annotation not available
  
 0.986
ENSCAPP00000014845
annotation not available
  
 0.981
FADS6
Fatty acid desaturase 6.
   
 0.976
ENSCAPP00000016271
annotation not available
   
 0.976
NDUFV1
NADH:ubiquinone oxidoreductase core subunit V1.
  
 0.975
ENSCAPP00000013887
annotation not available
  
 0.969
ENSCAPP00000010338
annotation not available
   
  0.964
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
   
  0.964
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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