STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF5Dynein axonemal assembly factor 5. (560 aa)    
Predicted Functional Partners:
ENSCAPP00000015438
annotation not available
    
 
 0.948
CCDC103
Coiled-coil domain containing 103.
      
 0.868
ENSCAPP00000001860
annotation not available
      
 0.865
SPAG1
Sperm associated antigen 1.
      
 0.851
ITPK1
Inositol-tetrakisphosphate 1-kinase.
    
   0.837
RRM2
Ribonucleotide reductase regulatory subunit M2.
    
   0.749
PIH1D2
PIH1 domain containing 2.
      
 0.688
PPP2R5D
Protein phosphatase 2 regulatory subunit B'delta.
    
   0.687
DNAI2
Dynein axonemal intermediate chain 2.
    
 
 0.681
ENSCAPP00000008654
annotation not available
    
 
 0.663
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.