Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BBOX1Gamma-butyrobetaine hydroxylase 1. (387 aa)    
Predicted Functional Partners:
ENSCAPP00000004085
annotation not available
  
 0.951
ALDH16A1
Aldehyde dehydrogenase 16 family member A1.
  
 0.929
ENSCAPP00000004320
annotation not available
  
 0.929
ALDH3A2
Aldehyde dehydrogenase 3 family member A2.
  
 0.928
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 0.924
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.910
TRIM17
Tripartite motif containing 17.
      
 0.893
ALDH3A1
Aldehyde dehydrogenase 3 family member A1.
  
 0.878
CRYL1
Crystallin lambda 1.
    
 0.867
ALDH3B1
Aldehyde dehydrogenase 3 family member B1.
  
 0.803
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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