ENSCAPP00000006167 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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Experiments

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[Homology]

Score

ENSCAPP00000006167

annotation not available (261 aa)

Predicted Functional Partners:

TRIP12

0.607

TRMT10B

0.540

TRIT1

0.528

PUS3

0.487

EFCAB3

0.485

PSEN2

0.485

PSEN1

0.477

LCP1

0.446

PLS1

0.446

METTL14

0.445

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFCAB3	ENSCAPP00000006167	ENSCAPP00000007019	ENSCAPP00000006167	EF-hand calcium binding domain 3.	annotation not available	0.485
ENSCAPP00000006167	EFCAB3	ENSCAPP00000006167	ENSCAPP00000007019	annotation not available	EF-hand calcium binding domain 3.	0.485
ENSCAPP00000006167	LCP1	ENSCAPP00000006167	ENSCAPP00000006151	annotation not available	Lymphocyte cytosolic protein 1.	0.446
ENSCAPP00000006167	METTL14	ENSCAPP00000006167	ENSCAPP00000016793	annotation not available	Methyltransferase like 14.	0.445
ENSCAPP00000006167	PLS1	ENSCAPP00000006167	ENSCAPP00000008486	annotation not available	Plastin 1.	0.446
ENSCAPP00000006167	PSEN1	ENSCAPP00000006167	ENSCAPP00000007853	annotation not available	Presenilin 1.	0.477
ENSCAPP00000006167	PSEN2	ENSCAPP00000006167	ENSCAPP00000008764	annotation not available	Presenilin 2.	0.485
ENSCAPP00000006167	PUS3	ENSCAPP00000006167	ENSCAPP00000011101	annotation not available	Pseudouridine synthase 3.	0.487
ENSCAPP00000006167	TRIP12	ENSCAPP00000006167	ENSCAPP00000012593	annotation not available	Thyroid hormone receptor interactor 12.	0.607
ENSCAPP00000006167	TRIT1	ENSCAPP00000006167	ENSCAPP00000017300	annotation not available	tRNA isopentenyltransferase 1.	0.528
ENSCAPP00000006167	TRMT10B	ENSCAPP00000006167	ENSCAPP00000002269	annotation not available	tRNA methyltransferase 10B.	0.540
LCP1	ENSCAPP00000006167	ENSCAPP00000006151	ENSCAPP00000006167	Lymphocyte cytosolic protein 1.	annotation not available	0.446
LCP1	PLS1	ENSCAPP00000006151	ENSCAPP00000008486	Lymphocyte cytosolic protein 1.	Plastin 1.	0.423
METTL14	ENSCAPP00000006167	ENSCAPP00000016793	ENSCAPP00000006167	Methyltransferase like 14.	annotation not available	0.445
PLS1	ENSCAPP00000006167	ENSCAPP00000008486	ENSCAPP00000006167	Plastin 1.	annotation not available	0.446
PLS1	LCP1	ENSCAPP00000008486	ENSCAPP00000006151	Plastin 1.	Lymphocyte cytosolic protein 1.	0.423
PSEN1	ENSCAPP00000006167	ENSCAPP00000007853	ENSCAPP00000006167	Presenilin 1.	annotation not available	0.477
PSEN1	PSEN2	ENSCAPP00000007853	ENSCAPP00000008764	Presenilin 1.	Presenilin 2.	0.997
PSEN2	ENSCAPP00000006167	ENSCAPP00000008764	ENSCAPP00000006167	Presenilin 2.	annotation not available	0.485
PSEN2	PSEN1	ENSCAPP00000008764	ENSCAPP00000007853	Presenilin 2.	Presenilin 1.	0.997