Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRYGACrystallin gamma A. (174 aa)    
Predicted Functional Partners:
CRYAB
Crystallin alpha B.
    
 
 0.876
ENSCAPP00000006307
annotation not available
   
    0.712
PRPH2
Peripherin 2.
   
  
 0.675
CRYBB2
Crystallin beta B2.
   
 
 0.600
ENSCAPP00000005881
annotation not available
   
 
 0.599
BFSP1
Beaded filament structural protein 1.
      
 0.568
ENSCAPP00000005908
annotation not available
      
 0.568
ENSCAPP00000001825
annotation not available
   
  
 0.494
MYL1
Myosin light chain 1.
   
  
 0.486
BFSP2
Beaded filament structural protein 2.
   
  
 0.466
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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