Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSF1RColony stimulating factor 1 receptor. (938 aa)    
Predicted Functional Partners:
IL34
Interleukin 34.
   
 0.999
CSF1
Colony stimulating factor 1.
   
 0.999
GRB2
Growth factor receptor bound protein 2.
   
 0.994
KITLG
KIT ligand.
   
 0.994
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 0.987
SPI1
Spi-1 proto-oncogene.
   
 0.977
ENSCAPP00000013675
annotation not available
    
 0.977
ENSCAPP00000004047
annotation not available
   
  
 0.958
C1QA
Complement C1q A chain.
   
  
 0.952
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.948
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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