Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NR1D2Nuclear receptor subfamily 1 group D member 2. (549 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.983
CRY1
Cryptochrome circadian regulator 1.
    
 0.983
CRY2
Cryptochrome circadian regulator 2.
    
 0.970
ENSCAPP00000002528
annotation not available
    
 0.951
CLOCK
Clock circadian regulator.
    
 0.951
NR1D1
Nuclear receptor subfamily 1 group D member 1.
   
 0.945
ENSCAPP00000001758
annotation not available
   
 0.942
ENSCAPP00000011708
annotation not available
    
 0.929
ENSCAPP00000013862
annotation not available
    
 0.929
PPARD
Peroxisome proliferator activated receptor delta.
    
 0.927
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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