Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RITA1RBPJ interacting and tubulin associated 1. (259 aa)    
Predicted Functional Partners:
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.900
COL4A2
Collagen type IV alpha 2 chain.
    
   0.844
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
    
   0.844
MEGF6
Multiple EGF like domains 6.
      
 0.636
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 
 0.627
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
    
   0.626
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
    
   0.626
DCP1B
Decapping mRNA 1B.
    
   0.622
MRPL15
Mitochondrial ribosomal protein L15.
      
 0.620
HIPK1
Homeodomain interacting protein kinase 1.
      
 0.584
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.