RPL14 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

RPL14

Ribosomal protein L14. (159 aa)

Predicted Functional Partners:

RPS14

0.999

ENSCAPP00000000576

0.999

RPL3

0.999

RPL8

0.999

ENSCAPP00000004658

0.999

ENSCAPP00000004779

0.999

ENSCAPP00000004781

0.999

RPL13A

0.999

ENSCAPP00000006028

0.999

RPL35

0.999

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000576	ENSCAPP00000004658	ENSCAPP00000000576	ENSCAPP00000004658	annotation not available	annotation not available	0.998
ENSCAPP00000000576	ENSCAPP00000004779	ENSCAPP00000000576	ENSCAPP00000004779	annotation not available	annotation not available	0.998
ENSCAPP00000000576	ENSCAPP00000004781	ENSCAPP00000000576	ENSCAPP00000004781	annotation not available	annotation not available	0.990
ENSCAPP00000000576	ENSCAPP00000006028	ENSCAPP00000000576	ENSCAPP00000006028	annotation not available	annotation not available	0.999
ENSCAPP00000000576	RPL13A	ENSCAPP00000000576	ENSCAPP00000004820	annotation not available	Ribosomal protein L13a.	0.999
ENSCAPP00000000576	RPL14	ENSCAPP00000000576	ENSCAPP00000006191	annotation not available	Ribosomal protein L14.	0.999
ENSCAPP00000000576	RPL3	ENSCAPP00000000576	ENSCAPP00000002985	annotation not available	Ribosomal protein L3.	0.995
ENSCAPP00000000576	RPL35	ENSCAPP00000000576	ENSCAPP00000006561	annotation not available	Ribosomal protein L35.	0.998
ENSCAPP00000000576	RPL8	ENSCAPP00000000576	ENSCAPP00000003457	annotation not available	Ribosomal protein L8.	0.998
ENSCAPP00000000576	RPS14	ENSCAPP00000000576	ENSCAPP00000000105	annotation not available	Ribosomal protein S14.	0.999
ENSCAPP00000004658	ENSCAPP00000000576	ENSCAPP00000004658	ENSCAPP00000000576	annotation not available	annotation not available	0.998
ENSCAPP00000004658	ENSCAPP00000004779	ENSCAPP00000004658	ENSCAPP00000004779	annotation not available	annotation not available	0.999
ENSCAPP00000004658	ENSCAPP00000004781	ENSCAPP00000004658	ENSCAPP00000004781	annotation not available	annotation not available	0.998
ENSCAPP00000004658	ENSCAPP00000006028	ENSCAPP00000004658	ENSCAPP00000006028	annotation not available	annotation not available	0.999
ENSCAPP00000004658	RPL13A	ENSCAPP00000004658	ENSCAPP00000004820	annotation not available	Ribosomal protein L13a.	0.999
ENSCAPP00000004658	RPL14	ENSCAPP00000004658	ENSCAPP00000006191	annotation not available	Ribosomal protein L14.	0.999
ENSCAPP00000004658	RPL3	ENSCAPP00000004658	ENSCAPP00000002985	annotation not available	Ribosomal protein L3.	0.999
ENSCAPP00000004658	RPL35	ENSCAPP00000004658	ENSCAPP00000006561	annotation not available	Ribosomal protein L35.	0.999
ENSCAPP00000004658	RPL8	ENSCAPP00000004658	ENSCAPP00000003457	annotation not available	Ribosomal protein L8.	0.999
ENSCAPP00000004658	RPS14	ENSCAPP00000004658	ENSCAPP00000000105	annotation not available	Ribosomal protein S14.	0.999