STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD12Sterile alpha motif domain containing 12. (156 aa)    
Predicted Functional Partners:
YEATS2
YEATS domain containing 2.
      
 0.903
IPCEF1
Interaction protein for cytohesin exchange factors 1.
    
 0.836
CNKSR3
CNKSR family member 3.
    
 0.836
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
    
 0.836
CNKSR1
Connector enhancer of kinase suppressor of Ras 1.
    
 0.836
STARD7
StAR related lipid transfer domain containing 7.
      
 0.825
MARCHF6
Membrane associated ring-CH-type finger 6.
      
 0.741
ENSCAPP00000007776
annotation not available
      
 0.666
DMTF1
Cyclin D binding myb like transcription factor 1.
      
 0.658
TADA2A
Transcriptional adaptor 2A.
      
 0.640
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.