Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006208annotation not available (133 aa)    
Predicted Functional Partners:
ENSCAPP00000017455
annotation not available
 
      0.710
FAM118A
Family with sequence similarity 118 member A.
      
 0.568
ENSCAPP00000001161
annotation not available
     
  0.495
STRAP
Serine/threonine kinase receptor associated protein.
     
  0.495
REEP6
Receptor accessory protein 6.
      
 0.454
PLD6
Phospholipase D family member 6.
      
 0.454
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.444
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
      
 0.442
RHBDD3
Rhomboid domain containing 3.
      
 0.442
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
      
 0.441
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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