Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006210annotation not available (274 aa)    
Predicted Functional Partners:
EFCAB9
EF-hand calcium binding domain 9.
    
 0.997
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.993
TMEM262
Transmembrane protein 262.
    
 0.993
CACNG6
Calcium voltage-gated channel auxiliary subunit gamma 6.
     
  0.991
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.990
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
    
 0.977
CACNA1G
Calcium voltage-gated channel subunit alpha1 G.
    
 0.976
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
    
 0.976
ENSCAPP00000013108
annotation not available
    
 0.972
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
    
 0.960
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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