Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006211annotation not available (190 aa)    
Predicted Functional Partners:
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
      
 0.925
ENSCAPP00000006375
annotation not available
    
 
 0.857
CDC6
Cell division cycle 6.
   
 0.857
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.816
INTU
Inturned planar cell polarity protein.
   
 0.816
CDC20
Cell division cycle 20.
   
 0.816
CDC27
Cell division cycle 27.
    
 0.806
ENSCAPP00000014263
annotation not available
   
 0.789
CYFIP2
Cytoplasmic FMR1 interacting protein 2.
      
 0.786
SKP1
S-phase kinase associated protein 1.
   
 0.771
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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