STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC13CUnc-13 homolog C. (2216 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.991
ENSCAPP00000006556
annotation not available
   
  0.936
ENSCAPP00000011144
annotation not available
   
 0.926
UNC13B
Unc-13 homolog B.
    
  0.876
RIMS3
Regulating synaptic membrane exocytosis 3.
   
 0.854
STXBP1
Syntaxin binding protein 1.
    
 0.786
TSPOAP1
TSPO associated protein 1.
   
 0.785
SNAP25
Synaptosome associated protein 25.
   
 0.780
RIMBP2
RIMS binding protein 2.
   
 0.741
STX1B
Syntaxin 1B.
    
 0.733
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.