STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006229annotation not available (243 aa)    
Predicted Functional Partners:
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.726
MST1R
Macrophage stimulating 1 receptor.
    
  0.726
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.674
WDR90
WD repeat domain 90.
    
 0.537
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.529
SPINK6
Serine peptidase inhibitor, Kazal type 6.
    
  0.500
F3
Coagulation factor III, tissue factor.
    
  0.498
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.464
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.464
ENSCAPP00000001392
annotation not available
    
  0.460
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.