Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006229annotation not available (243 aa)    
Predicted Functional Partners:
CSTB
Cystatin B.
     
 0.618
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.519
MST1R
Macrophage stimulating 1 receptor.
    
  0.519
WDR90
WD repeat domain 90.
    
 0.494
C5
Complement C5.
    
 0.493
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.487
ENSCAPP00000000391
annotation not available
    
  0.464
TNS1
Tensin 1.
    
  0.464
ENSCAPP00000013932
annotation not available
    
  0.464
TNS2
Tensin 2.
    
  0.464
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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