Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC12A3Solute carrier family 12 member 3. (982 aa)    
Predicted Functional Partners:
STK39
Serine/threonine kinase 39.
    
 0.985
WNK4
WNK lysine deficient protein kinase 4.
    
 
 0.879
KCNJ1
Potassium inwardly rectifying channel subfamily J member 1.
   
  
 0.787
CLDN16
Claudin 16.
   
  
 0.744
SNX1
Sorting nexin 1.
    
   0.740
BSND
Barttin CLCNK type accessory beta subunit.
   
  
 0.734
NPHS2
NPHS2 stomatin family member, podocin.
  
 
 0.732
ENSCAPP00000015740
annotation not available
   
  0.703
ENSCAPP00000018298
annotation not available
    
  0.701
TK1
Thymidine kinase 1.
   
 
  0.681
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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