STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006238annotation not available (1043 aa)    
Predicted Functional Partners:
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
0.989
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.988
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
   
0.987
ENSCAPP00000000243
annotation not available
 
   
 0.963
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.958
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
   
0.921
ENSCAPP00000017763
annotation not available
    
 0.906
CALML3
Calmodulin like 3.
    
 0.905
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
    
 0.891
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.891
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.