Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006238annotation not available (1043 aa)    
Predicted Functional Partners:
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.998
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
   
 0.998
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.995
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.980
ENSCAPP00000000243
annotation not available
 
   
 0.973
FYN
FYN proto-oncogene, Src family tyrosine kinase.
    
 0.951
SYNGAP1
Synaptic Ras GTPase activating protein 1.
   
 
 0.943
ENSCAPP00000004076
annotation not available
   
 0.938
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
   
 0.923
ENSCAPP00000017763
annotation not available
    
 0.916
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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