Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM39Tripartite motif containing 39. (488 aa)    
Predicted Functional Partners:
TRIM17
Tripartite motif containing 17.
    
   0.897
UBTD1
Ubiquitin domain containing 1.
    
   0.879
UBXN6
UBX domain protein 6.
    
   0.816
ANKRD11
Ankyrin repeat domain 11.
    
 0.710
POU5F2
POU domain class 5, transcription factor 2.
    
 0.694
ENSCAPP00000010002
annotation not available
    
 0.694
ZNF12
Zinc finger protein 12.
   
 0.670
ICOS
Inducible T cell costimulator.
   
 0.670
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
      
 0.660
ZNF366
Zinc finger protein 366.
    
 0.653
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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