Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM47RNA binding motif protein 47. (591 aa)    
Predicted Functional Partners:
ENSCAPP00000015862
annotation not available
    
 0.966
A1CF
APOBEC1 complementation factor.
   
  0.956
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.919
ENSCAPP00000010593
annotation not available
   
 
  0.804
ENSCAPP00000010711
annotation not available
   
 
  0.804
PCBP2
poly(rC) binding protein 2.
   
 0.763
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
     
 0.737
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.724
ENSCAPP00000003691
annotation not available
   
 0.723
ENSCAPP00000014392
annotation not available
   
 0.723
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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