Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006245annotation not available (218 aa)    
Predicted Functional Partners:
SEPTIN11
Septin 11.
   
 0.999
SEPTIN7
Septin 7.
   
 0.998
ENSCAPP00000018289
annotation not available
   
 0.998
SEPTIN9
Septin 9.
   
 0.997
SEPTIN8
Septin 8.
   
  0.997
SEPTIN2
Septin 2.
   
 0.996
ENSCAPP00000003889
annotation not available
   
 0.996
SEPTIN12
Septin 12.
   
  0.996
SEPTIN1
Septin 1.
   
 0.995
SEPTIN14
Septin 14.
   
  0.994
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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