STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGMS1Sphingomyelin synthase 1. (419 aa)    
Predicted Functional Partners:
SMPD1
Sphingomyelin phosphodiesterase 1.
     
 0.956
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.953
ASAH2
N-acylsphingosine amidohydrolase 2.
 
   
 0.936
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.935
CERS2
Ceramide synthase 2.
     
 0.933
DEGS1
Delta 4-desaturase, sphingolipid 1.
   
 
 0.932
CERS3
Ceramide synthase 3.
     
 0.930
ASAH1
N-acylsphingosine amidohydrolase 1.
     
 0.930
ACER2
Alkaline ceramidase 2.
     
 0.928
GALC
Galactosylceramidase.
     
 0.919
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.