STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOMER2Homer scaffold protein 2. (355 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
  
 
0.979
ENSCAPP00000012599
annotation not available
    
0.929
GRM1
Glutamate metabotropic receptor 1.
    
 0.923
ENSCAPP00000014241
annotation not available
    
 0.923
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.763
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.680
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.584
ENSCAPP00000017241
annotation not available
    
 
 0.574
ENSCAPP00000001392
annotation not available
    
  0.573
SFN
Stratifin.
    
 0.573
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.