Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMC1Transmembrane channel like 1. (724 aa)    
Predicted Functional Partners:
ENSCAPP00000017964
annotation not available
    
 0.957
CLIC5
Chloride intracellular channel 5.
      
 0.949
CIB2
Calcium and integrin binding family member 2.
    
 0.928
LHFPL5
LHFPL tetraspan subfamily member 5.
    
 0.907
ENSCAPP00000004359
annotation not available
      
 0.898
TMIE
Transmembrane inner ear.
   
 
 0.864
RPGRIP1L
RPGRIP1 like.
    
 0.851
WFS1
Wolframin ER transmembrane glycoprotein.
    
 
 0.837
CIB3
Calcium and integrin binding family member 3.
    
 0.824
CIB1
Calcium and integrin binding 1.
    
 0.820
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.