STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF398Zinc finger protein 398. (546 aa)    
Predicted Functional Partners:
ELMO1
Engulfment and cell motility 1.
    
 0.969
ZNF212
Zinc finger protein 212.
    
   0.959
ZNF282
Zinc finger protein 282.
    
   0.959
ZNF746
Zinc finger protein 746.
    
 
 0.950
ZNF777
Zinc finger protein 777.
    
   0.839
TP53
Tumor protein p53.
   
  0.830
MFAP1
Microfibril associated protein 1.
   
   0.768
ENSCAPP00000018394
annotation not available
    
 0.610
YPEL3
Yippee like 3.
    
 
 0.603
RPL6
Ribosomal protein L6.
    
 
 0.601
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.