STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF398Zinc finger protein 398. (546 aa)    
Predicted Functional Partners:
ZNF282
Zinc finger protein 282.
  
  
0.630
ZNF212
Zinc finger protein 212.
   
  
0.626
ELMO1
Engulfment and cell motility 1.
    
  0.619
TRIM28
Tripartite motif containing 28.
    
 0.566
ZNF746
Zinc finger protein 746.
  
 
0.565
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.562
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.561
KDM6B
Lysine demethylase 6B.
    
 0.552
MRPS10
Mitochondrial ribosomal protein S10.
   
  0.544
ENSCAPP00000013045
annotation not available
    
  0.544
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.