Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLCN3Chloride voltage-gated channel 3. (795 aa)    
Predicted Functional Partners:
CLCN4
Chloride voltage-gated channel 4.
   
  0.988
EXOSC10
Exosome component 10.
     
 0.888
FBF1
Fas binding factor 1.
      
 0.879
ENSCAPP00000005429
annotation not available
    
 
 0.868
PTK6
Protein tyrosine kinase 6.
     
 0.860
SLC17A9
Solute carrier family 17 member 9.
      
 0.772
ENSCAPP00000004616
annotation not available
    
 0.752
ENSCAPP00000002335
annotation not available
     
 0.742
ITSN2
Intersectin 2.
      
 0.731
FRMD6
FERM domain containing 6.
     
 0.724
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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