Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DYMDymeclin. (476 aa)    
Predicted Functional Partners:
SH3GL3
SH3 domain containing GRB2 like 3, endophilin A3.
      
 0.850
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.790
HHIP
Hedgehog interacting protein.
      
 0.785
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
      
 0.751
PGBD5
piggyBac transposable element derived 5.
      
 0.653
WDR48
WD repeat domain 48.
      
 0.652
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
   
  
 0.649
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
   
  
 0.649
ENSCAPP00000015041
annotation not available
      
 0.642
ENSCAPP00000003514
annotation not available
      
 0.640
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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