Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006277annotation not available (222 aa)    
Predicted Functional Partners:
RASSF3
Ras association domain family member 3.
      
 0.665
ENSCAPP00000000843
annotation not available
      
 0.661
NOCT
Nocturnin.
    
 
 0.615
KDELR3
KDEL endoplasmic reticulum protein retention receptor 3.
    
   0.599
IPCEF1
Interaction protein for cytohesin exchange factors 1.
      
 0.570
ENSCAPP00000009147
annotation not available
    
   0.565
PUM2
Pumilio RNA binding family member 2.
    
   0.565
ENSCAPP00000009498
annotation not available
      
 0.563
SBF1
SET binding factor 1.
      
 0.563
RIOK3
RIO kinase 3.
      
 0.557
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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