STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PXMP4Peroxisomal membrane protein 4. (174 aa)    
Predicted Functional Partners:
ENSCAPP00000010317
annotation not available
    
 0.860
CWC15
CWC15 spliceosome associated protein homolog.
      
 0.856
PEX12
Peroxisomal biogenesis factor 12.
   
 
 0.853
PEX16
Peroxisomal biogenesis factor 16.
     
 0.831
PXMP2
Peroxisomal membrane protein 2.
     
 0.830
PEX11A
Peroxisomal biogenesis factor 11 alpha.
     
 0.821
ENSCAPP00000001938
annotation not available
      
 0.815
ACBD5
acyl-CoA binding domain containing 5.
     
 0.773
PEX3
Peroxisomal biogenesis factor 3.
     
 0.768
ATAD1
ATPase family AAA domain containing 1.
     
 0.729
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.