STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT5Synaptotagmin 5. (386 aa)    
Predicted Functional Partners:
SNAP25
Synaptosome associated protein 25.
    
 0.725
ENSCAPP00000005959
annotation not available
    
 0.700
ITSN2
Intersectin 2.
     
 0.674
STX1A
Syntaxin 1A.
   
 0.671
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.654
STON2
Stonin 2.
    
 0.652
VAMP1
Vesicle associated membrane protein 1.
    
 0.644
STX1B
Syntaxin 1B.
   
 0.637
STX2
Syntaxin 2.
    
 0.602
STX3
Syntaxin 3.
    
 0.597
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.